🐛 Fundamentals
This skill helps you debug SAM/BAM, validate AGP coordinates, and troubleshoot sequencing data using common formats and quality metrics.
npx playbooks add skill delphine-l/claude_global --skill fundamentals
About Fundamentals
The Fundamentals skill is a debugging tool that assists with troubleshooting sequencing data by validating AGP coordinates and using common formats and quality metrics. It is specifically designed to help debug SAM and BAM files, which are formats used for storing biological sequence data. Developers would reach for this skill when they need to identify and resolve issues with their sequencing data, such as validating the accuracy of genomic coordinates or assessing data quality.
Its 19-word system prompt specializes your agent in debugging with structured methodology and proven output formats. Install with one command to activate immediately.
Use Cases
- Systematically diagnosing production errors and crashes
- Tracing memory leaks and performance bottlenecks
- Debugging async race conditions and concurrency issues
- Root-cause analysis with structured logging
Example Prompts
System Prompt (19 words)
This skill helps you debug SAM/BAM, validate AGP coordinates, and troubleshoot sequencing data using common formats and quality metrics.
Frequently Asked Questions
What is Fundamentals?
Fundamentals is a free debugging skill for AI coding agents. This skill helps you debug SAM/BAM, validate AGP coordinates, and troubleshoot sequencing data using common formats and quality metrics.. It provides a specialized system prompt that configures your agent with debugging expertise.
How do I use Fundamentals with Claude Code?
Run npx playbooks add skill delphine-l/claude_global --skill fundamentals in your terminal to install Fundamentals into your Claude Code session. It works immediately after installation.
Which AI coding agents work with Fundamentals?
Fundamentals is compatible with Claude Code, Cursor, GitHub Copilot, Windsurf, OpenClaw, Cline, and any AI agent that supports custom system prompts or .cursorrules files.
Is Fundamentals free to use?
Yes, Fundamentals is completely free and open source. The full source is available on GitHub at https://github.com/delphine-l/claude_global/tree/main/skills/bioinformatics/fundamentals. You only need a subscription to the AI agent you use it with.
