📋 Alphafold
Validate protein designs using AlphaFold2 structure prediction. Use this skill when: (1) Validating designed sequences fold correctly, (2) Predicting binder-target complex structures, (3) Calculating confidence metrics (pLDDT, pTM, ipTM), (4) Self-consistency validation of designs, (5) Multi-chain c
npx playbooks add skill adaptyvbio/protein-design-skills --skill alphafold
About Alphafold
Validate protein designs using AlphaFold2 structure prediction. Use this skill when: (1) Validating designed sequences fold correctly, (2) Predicting binder-target complex structures, (3) Calculating confidence metrics (pLDDT, pTM, ipTM), (4) Self-consistency validation of designs, (5) Multi-chain c
This compact 37-word instruction set is purpose-built for developer workflow work in AI coding agents. Install with a single command.
Use Cases
- Streamlining git workflows and commit conventions
- Setting up CI/CD pipelines and deployment scripts
- Managing monorepos and multi-package projects
- Automating release notes and changelogs
Example Prompts
System Prompt (37 words)
Validate protein designs using AlphaFold2 structure prediction. Use this skill when: (1) Validating designed sequences fold correctly, (2) Predicting binder-target complex structures, (3) Calculating confidence metrics (pLDDT, pTM, ipTM), (4) Self-consistency validation of designs, (5) Multi-chain c
Frequently Asked Questions
What is Alphafold?
Alphafold is a free developer workflow skill for AI coding agents. Validate protein designs using AlphaFold2 structure prediction. Use this skill when: (1) Validating designed sequences fold correctly, (2) Predicting binder-target complex structures, (3) Calculating confidence metrics (pLDDT, pTM, ipTM), (4) Self-consistency validation of designs, (5) Multi-chain c. It provides a specialized system prompt that configures your agent with developer workflow expertise.
How do I use Alphafold with Claude Code?
Run npx playbooks add skill adaptyvbio/protein-design-skills --skill alphafold in your terminal to install Alphafold into your Claude Code session. It works immediately after installation.
Which AI coding agents work with Alphafold?
Alphafold is compatible with Claude Code, Cursor, GitHub Copilot, Windsurf, OpenClaw, Cline, and any AI agent that supports custom system prompts or .cursorrules files.
Is Alphafold free to use?
Yes, Alphafold is completely free and open source. The full source is available on GitHub at https://github.com/adaptyvbio/protein-design-skills/tree/main/skills/alphafold. You only need a subscription to the AI agent you use it with.
